Gene

col22a1

ID
ZDB-GENE-090827-2
Name
collagen, type XXII, alpha 1
Symbol
col22a1 Nomenclature History
Previous Names
  • col9a1 (1)
  • prp
Type
protein_coding_gene
Location
Unmapped
Description
Involved in several processes, including embryonic caudal fin morphogenesis; fin regeneration; and muscle attachment. Predicted to localize to collagen trimer. Is expressed in several structures, including head; heart; inner ear; myotome; and pectoral fin.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
17 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col22a1 Human Ortholog
No data available
Associated With col22a1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002035 von Willebrand factor, type A
Domain IPR048287 Thrombospondin-like, N-terminal domain
Family IPR050938 Collagen and Collagen-like Structural Proteins
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR036465 von Willebrand factor A-like domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length Collagen and Collagen-like Structural Proteins Collagen triple helix repeat Concanavalin A-like lectin/glucanase domain superfamily Thrombospondin-like, N-terminal domain von Willebrand factor A-like domain superfamily von Willebrand factor, type A
UniProtKB:A0A0R4IR54 1622
UniProtKB:M5BFV8 1622
Transcripts
Genome Browsers
No data available
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-col22a1 polyclonal Rabbit
  • IHC
  • WB
3
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations