ZFIN ID: ZDB-GENE-990415-272

Mapping Details

Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Symbol: ddx4
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 10 6,884,123 - 6,905,574 GRCz11
Ensembl 10 6,884,123 - 6,905,574 GRCz11
Vega 10 6,925,423 - 6,946,874 GRCv10
NCBI Map Viewer 10 6,884,151 - 6,905,574 GRCz11
UCSC 10 - GRCz11
Mapped Clones containing ddx4
DKEY-117I20 Chr: 10 Details
CH73-194F17 Chr: 10 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa6158 10 6,896,599 GRCz11 Busch-Nentwich et al., 2013
10 6,937,899 GRCz10 Busch-Nentwich et al., 2013
10 6,561,271 Zv9 Busch-Nentwich et al., 2013
sa9472 10 6,904,881 GRCz11 Busch-Nentwich et al., 2013
10 6,946,181 GRCz10 Busch-Nentwich et al., 2013
10 6,569,553 Zv9 Busch-Nentwich et al., 2013
sa15900 10 6,892,878 GRCz11 Busch-Nentwich et al., 2013
10 6,934,178 GRCz10 Busch-Nentwich et al., 2013
10 6,557,550 Zv9 Busch-Nentwich et al., 2013
sa18973 10 6,904,881 GRCz11 Busch-Nentwich et al., 2013
10 6,946,181 GRCz10 Busch-Nentwich et al., 2013
10 6,569,553 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
10 34.5 cM vasa Mother of Pearl (MOP) Postlethwait, John H. Data
10 29.6 cM vasa Heat Shock (HS) Woods, Ian G. Data
22 22.96 cM vasa Gates et al (GAT) Talbot, William S. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
fb78a06 EST 10 9.0 cR Bartfai et al., 2003 Bartfai et al. (2003., DNA and Cell Biology 22:47-54) report mapping vasa to LG10 approximately 9cR from fb78a06 on the T51 mapping panel.
fb78a06 EST 10 3.56 cR Bartfai et al., 2003 Bartfai et al. (2003., DNA and Cell Biology 22:47-54) report mapping vasa to LG10 approximately 3.56cR from fb78a06 on the LN54 mapping panel.

OTHER MAPPING INFORMATION: No data available