ZFIN ID: ZDB-GENE-990621-7

Mapping Details

Gene Name: doublesex and mab-3 related transcription factor 2a
Symbol: dmrt2a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 5 45,007,962 - 45,011,116 GRCz11
Ensembl 5 45,007,962 - 45,011,116 GRCz11
Vega 5 44,407,809 - 44,410,963 GRCv10
NCBI Map Viewer 5 45,007,962 - 45,011,116 GRCz11
UCSC 5 - GRCz11
Mapped Clones containing dmrt2a
DKEYP-31E5 Chr: 5 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
imm003 5 45,008,440 - 45,008,539 GRCz11 Pinto et al., 2018
sa33689 5 45,009,292 GRCz11 Busch-Nentwich et al., 2013
5 44,409,139 GRCz10 Busch-Nentwich et al., 2013
5 46,627,874 Zv9 Busch-Nentwich et al., 2013
sa40541 5 45,010,645 GRCz11 Busch-Nentwich et al., 2013
5 44,410,492 GRCz10 Busch-Nentwich et al., 2013
5 46,629,227 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
5 111.4 cM terra Mother of Pearl (MOP) Postlethwait, John H. Data
5 236.14 cR terra Loeb/NIH/5000/4000 (LN54) Johnson, Stephen L. Data
5 89.0 cM terra Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z8122 SSLP 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
apoa1a GENE 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
epd GENE 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
zehn1245 EST 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
atp1b2b GENE 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
ins GENE 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.

OTHER MAPPING INFORMATION
Chr 5 Rajarao et al., 2002 Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to  ...
Genomic Feature imm004 is an allele of dmrt2a