ZFIN ID: ZDB-GENE-000607-13

Mapping Details

Gene Name: SRY-box transcription factor 5
Symbol: sox5
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 4 16,982,249 - 17,055,782 GRCz11
Ensembl 4 16,982,249 - 17,055,782 GRCz11
Vega 4 16,993,273 - 17,066,806 GRCv10
NCBI Map Viewer 4 16,981,414 - 17,216,212 GRCz11
UCSC 4 - GRCz11
Mapped Clones containing sox5
DKEY-215A8 Chr: 4 Details
CH211-47D3 Chr: 4 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
nju904 4 16,995,490 - 16,995,505 GRCz11 Zebrafish Nomenclature Committee
sa18782 4 16,991,740 GRCz11 Busch-Nentwich et al., 2013
4 17,002,764 GRCz10 Busch-Nentwich et al., 2013
4 16,059,924 Zv9 Busch-Nentwich et al., 2013
sa33439 4 16,988,050 GRCz11 Busch-Nentwich et al., 2013
4 16,999,074 GRCz10 Busch-Nentwich et al., 2013
4 16,056,234 Zv9 Busch-Nentwich et al., 2013
sa33440 4 17,017,427 GRCz11 Busch-Nentwich et al., 2013
4 17,028,451 GRCz10 Busch-Nentwich et al., 2013
4 16,085,611 Zv9 Busch-Nentwich et al., 2013
la011378Tg 4 16,085,508 - 16,085,518 Zv9
la015343Tg 4 16,092,306 - 16,092,316 Zv9
la015344Tg 4 16,102,109 - 16,102,119 Zv9
la015345Tg 4 16,120,582 - 16,120,592 Zv9
la024453Tg 4 16,102,970 - 16,102,980 Zv9
la024454Tg 4 16,115,927 - 16,115,937 Zv9
la028982Tg 4 16,095,947 - 16,095,957 Zv9
la028983Tg 4 16,117,428 - 16,117,438 Zv9

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
4 211.74 cR IBD5067 Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available
Genomic Feature nub13 is an allele of sox5