ZFIN ID: ZDB-GENE-990715-11

Mapping Details

Gene Name: EBF transcription factor 2
Symbol: ebf2
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 5 67,390,645 - 67,439,831 GRCz11
Ensembl 5 67,390,645 - 67,439,831 GRCz11
Vega 5 66,712,276 - 66,761,462 GRCv10
NCBI Map Viewer 5 67,390,600 - 67,439,831 GRCz11
UCSC 5 - GRCz11
Mapped Clones containing ebf2
DKEY-251I10 Chr: 5 Details
CH211-110P13 Chr: 5 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa2249 5 67,398,161 GRCz11 Busch-Nentwich et al., 2013
5 66,719,792 GRCz10 Busch-Nentwich et al., 2013
5 70,394,648 Zv9 Busch-Nentwich et al., 2013
sa20582 5 67,432,013 GRCz11 Busch-Nentwich et al., 2013
5 66,753,644 GRCz10 Busch-Nentwich et al., 2013
5 70,428,500 Zv9 Busch-Nentwich et al., 2013
sa44626 5 67,433,040 GRCz11 Busch-Nentwich et al., 2013
5 66,754,671 GRCz10 Busch-Nentwich et al., 2013
5 70,429,527 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
5 333.09 cR coe2 Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
5 121.7 cM coe2 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z23067 SSLP 5 Farber et al., 2003 Farber et al. (Genome Res 13, 1082-1096, 2003) mapped the anxa1b gene to LG5  ...
z23067 SSLP 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1b gene to LG5  ...
z23067 SSLP 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1c gene to LG5  ...
z23067 SSLP 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1c gene to LG5  ...
anxa1b GENE 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1b gene to LG5  ...
anxa1c GENE 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1c gene to LG5  ...
anxa1b GENE 5 Farber et al., 2003 Farber et al. (Genome Res 13, 1082-1096, 2003) mapped the anxa1b gene to LG5  ...
anxa1c GENE 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1c gene to LG5  ...
sebox GENE 5 0.4 cR Poulain et al., 2002 Poulain and Lepage (2002. Dev 129:4901-4914.) report mapping og9x 0.4 cR away from coe2 on linkage group 5 on the LN54 mapping panel.

OTHER MAPPING INFORMATION
Chr 5 Farber et al., 2003 Farber et al. (Genome Res 13, 1082-1096, 2003) mapped the anxa1b gene to LG5 between Z23067 and  ...
Chr 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1b gene to LG5 between Z23067 and coe2  ...
Chr 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1c gene to LG5 between Z23067 and coe2  ...
Chr 5 Farber et al., 2003 Farber et al (Genome Res 13, 1082-1096, 2003) mapped the anxa1c gene to LG5 between Z23067 and coe2  ...
Genomic Feature sa20582 is an allele of ebf2