Genomic Feature
pu106
- ID
- ZDB-ALT-200824-8
- Name
- pu106
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- GuangJun Zhang Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 5: 18041387 - 18042423 (GRCz11) (1) Details
- Nucleotide change
- AAGGGCCACCAGAACAACGGTGTTCCACAGCTGCTGGAGATATTTCTGGACAAAACATGAACAGAAAAGACATTTTTCTCCATGCTGAAAAATAAAAAGAGTAATTTCTCTACATGTGACAAACAGTATAACGTGACAAATAAGTGACGACTGGCCACTGAGTTATTAGAAAATAATGTTCACCCGAAGTGGTGATGTGTCCATGACACAAAAAGCCCCTTTCACACAGTAATACAGGTAAAAATCCGTAAAATTACCAAAATGACTTAACTGGATTTTCAAAACAATCCTGTTCACACATACAGATCTTTCCGGAAAAATTGCTGGTAATTTTCTAAAAGGTCTCTATGTGTGAAAGGGGCTATTGAAAATGGCTTTTACACCATGAGTGCACATTATTTTTAATAAATCACATTACATGACAACTCAAGACCAATAAAAGACTTAAAATAAAGTACTTTAAAATACTTTTTACGTTTTTTTTTTTTTTTTTTAAATATACCAAGTTGCAGTAAAGTGGAGTAATCTGACTAAATTACATGCTGACTGGATTGTGTGTTGAATTAGGCAAGGCAAATTTATTTATATAGCACATTTTATACACAATGGTAATTCAATGTTAATTCAATGTTTATGTAAAGCACTTACAATGGTGAGTGCTTTACATAAACAAGAATAAAAAGAAGCAAGTATAAAAAATTTAAAATGATTAACAATGTATTAAAATGTGTTCAAACAGGTTTAGAACTTATGCTTAAAAAAAAAAAAAGACAAGCAGATTCCTGTTTGGAACTACTACTACTGCTACTACTACTGTGCCTTTCCCGGAAAACATCCATTAAACAAAATCACATTCGAACATCCAACAGCACCTTATAAGCATTATTAAGAAACATGAAACGATTACATATAAGTGCTGAAATATCTTCAGCCAAGTTATTATGGTAACCCCGGATGACATAATGTTTTTACCTGGACCTGAGAGTTAGTCTCCCCAGTGCAGATGACCCCTTGCCATTCCCCATATAAGCCTCCTC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1036 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTGTCATTAATTGTAATCATACAGTGAGATTATTGTCTGCACAAGGAGTCTGAAAATGGCCAGTGTTCCACACAGAGAGATCTGATCATCATCCAGTCTTTCTGAAATGACATAACAAAAAACGACCTGCAACCAATCTTTTTTTTTTGTGAAAGATTTTTGGATGAATACAGTTCAAAATAACATCATCTATTTGATATAGGAATTTTTCAACATTATACATGTTTTTTGTGTCGTATTTGATCAATTCAGTGAATTCTTGATCAACAAACCTTTGTTTCTGTTGGGAAAAAAGTATTTTTGTTTGGAAGTTGGAAAGCCACTGTATTTTCCTTCCAGTCTCCACTTAATGTTGCTTGTCAAATTAGTGTTTTAAATCATAAACTTTGTAACTTTCAGAATGAATCTGTCCCAAAAACACTGTTCACCTCTAAATCGTCATTAAATTGGTTGTCCTGGTACTGCCAGCGTGCTTGAACTATGACCCCTGTGGAGAGAAC
AAGGGCCACCAGAACAACGGTGTTCCACAGCTGCTGGAGATATTTCTGGACAAAACATGAACAGAAAAGACATTTTTCTCCATGCTGAAAAATAAAAAGAGTAATTTCTCTACATGTGACAAACAGTATAACGTGACAAATAAGTGACGACTGGCCACTGAGTTATTAGAAAATAATGTTCACCCGAAGTGGTGATGTGTCCATGACACAAAAAGCCCCTTTCACACAGTAATACAGGTAAAAATCCGTAAAATTACCAAAATGACTTAACTGGATTTTCAAAACAATCCTGTTCACACATACAGATCTTTCCGGAAAAATTGCTGGTAATTTTCTAAAAGGTCTCTATGTGTGAAAGGGGCTATTGAAAATGGCTTTTACACCATGAGTGCACATTATTTTTAATAAATCACATTACATGACAACTCAAGACCAATAAAAGACTTAAAATAAAGTACTTTAAAATACTTTTTACGTTTTTTTTTTTTTTTTTTAAATATACCAAGTTGCAGTAAAGTGGAGTAATCTGACTAAATTACATGCTGACTGGATTGTGTGTTGAATTAGGCAAGGCAAATTTATTTATATAGCACATTTTATACACAATGGTAATTCAATGTTAATTCAATGTTTATGTAAAGCACTTACAATGGTGAGTGCTTTACATAAACAAGAATAAAAAGAAGCAAGTATAAAAAATTTAAAATGATTAACAATGTATTAAAATGTGTTCAAACAGGTTTAGAACTTATGCTTAAAAAAAAAAAAAGACAAGCAGATTCCTGTTTGGAACTACTACTACTGCTACTACTACTGTGCCTTTCCCGGAAAACATCCATTAAACAAAATCACATTCGAACATCCAACAGCACCTTATAAGCATTATTAAGAAACATGAAACGATTACATATAAGTGCTGAAATATCTTCAGCCAAGTTATTATGGTAACCCCGGATGACATAATGTTTTTACCTGGACCTGAGAGTTAGTCTCCCCAGTGCAGATGACCCCTTGCCATTCCCCATATAAGCCTCCTC/- TTGAACGACCGCAGCTGGACCACAGGGTCAAGGTGGCCCCCTTTGACACCACACACAGAAATATCACACACTTACACTAA ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None