Gene

sdccag8

ID

ZDB-GENE-090313-318

Name

SHH signaling and ciliogenesis regulator sdccag8

Symbol

sdccag8 Nomenclature History

Previous Names

si:dkey-60b15.1

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Involved in chordate embryonic development. Predicted to localize to centriole and centrosome. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 16 and Senior-Loken syndrome. Orthologous to human SDCCAG8 (SHH signaling and ciliogenesis regulator SDCCAG8).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With sdccag8 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
Bardet-Biedl syndrome 16	Alliance	Bardet-Biedl syndrome 16	615993
Senior-Loken syndrome	Alliance	Senior-Loken syndrome 7	613615

Associated With sdccag8 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR031887	Serologically defined colon cancer antigen 8

Domain Details Per Protein

Protein	Length	Serologically defined colon cancer antigen 8
UniProtKB:B8JK76 InterPro	701
UniProtKB:A0A2R8QM06 InterPro	702
UniProtKB:A0A8M9PXV8 InterPro	701

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sdccag8-201 (1) Ensembl	Havana	2672 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sdccag8-202 (1) Ensembl	Havana	408 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sdccag8-203 (1) Ensembl	Havana	667 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sdccag8-204 (1) Ensembl	Havana	934 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sdccag8-205 (1) Ensembl	Havana	783 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sdccag8-206 (1) Ensembl	Ensembl	2512 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations