Gene

hoxc11b

ID
ZDB-GENE-000822-3
Name
homeobox C11b
Symbol
hoxc11b Nomenclature History
Previous Names
  • Hoxa11
  • im:7165141
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have DNA binding activity and DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in presumptive telencephalon; pronephric duct; pronephric mesoderm; pronephros; and tail bud. Orthologous to human HOXC11 (homeobox C11).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
16 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hoxc11b Human Ortholog
No data available
Associated With hoxc11b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR020479 Homeodomain, metazoa
Domain IPR021918 Domain of unknown function DUF3528, homeobox protein, eukaryotic
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Domain of unknown function DUF3528, homeobox protein, eukaryotic Homedomain-like superfamily Homeobox, conserved site Homeodomain Homeodomain, metazoa
UniProtKB:A0A0R4IDM3 306
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA hoxc11b-201 (1) Havana 1398 nt
mRNA hoxc11b-202 (1) Ensembl 4372 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations